Residue Class Reference

#include <PRO.h>

List of all members.

Public Member Functions
	Residue ()
void	setParm_No (char *str)
void	setParm_chainName (char *str)
void	setParm_seqlNo (int i)
void	setParm_chainSeqlNo (int i)
void	setParm_name (char *str)
void	setParm_name_1 (char *str)
void	setParm_name_all (char *str)
void	setParm_homology (char *str)
void	setParm_SS (char *str)
void	setParm_phi (float f)
void	setParm_psi (float f)
void	setParm_hydrophobicity (bool b)
void	setParm_startAtomSeqlNo (int i)
void	setParm_endAtomSeqlNo (int i)
void	setParm_totalAtomNo (int i)
void	setParm_mapAtom (char *str, Atom *at)
void	setParm_active (const bool b)
void	setParm ()
bool	connection (Residue &r2)
void	addAtom (Atom atm)
void	clear ()
Public Attributes
char	name [5]
char	name_1 [2]
char	name_all [15]
bool	hydrophobicity
char	SS [2]
float	phi
float	psi
char	homology [MAX_HOMOLOGY]
char	No [6]
char	chainName [2]
int	seqlNo
int	chainSeqlNo
vector< Atom >	atom
map< string, Atom * >	mapAtom
int	startAtomSeqlNo
int	endAtomSeqlNo
int	totalAtomNo
bool	active
Friends
ofstream &	operator<< (ofstream &ostrm, Residue residue)

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Constructor & Destructor Documentation

Residue::Residue (   )

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Member Function Documentation

void Residue::addAtom (  Atom  atm  )

void Residue::clear (   )

bool Residue::connection (  Residue &  r2  )

void Residue::setParm (   )

void Residue::setParm_active (  const bool  b  )  [inline]

void Residue::setParm_chainName (  char *  str  )  [inline]

void Residue::setParm_chainSeqlNo (  int  i  )  [inline]

void Residue::setParm_endAtomSeqlNo (  int  i  )  [inline]

void Residue::setParm_homology (  char *  str  )  [inline]

void Residue::setParm_hydrophobicity (  bool  b  )  [inline]

void Residue::setParm_mapAtom (  char *  str, Atom *  at )  [inline]

void Residue::setParm_name (  char *  str  )  [inline]

void Residue::setParm_name_1 (  char *  str  )  [inline]

void Residue::setParm_name_all (  char *  str  )  [inline]

void Residue::setParm_No (  char *  str  )  [inline]

void Residue::setParm_phi (  float  f  )  [inline]

void Residue::setParm_psi (  float  f  )  [inline]

void Residue::setParm_seqlNo (  int  i  )  [inline]

void Residue::setParm_SS (  char *  str  )  [inline]

void Residue::setParm_startAtomSeqlNo (  int  i  )  [inline]

void Residue::setParm_totalAtomNo (  int  i  )  [inline]

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Friends And Related Function Documentation

ofstream& operator<< (  ofstream &  ostrm, Residue  residue )  [friend]

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Member Data Documentation

bool Residue::active

vector<Atom> Residue::atom

char Residue::chainName[2]

int Residue::chainSeqlNo

int Residue::endAtomSeqlNo

char Residue::homology[MAX_HOMOLOGY]

bool Residue::hydrophobicity

map<string, Atom *> Residue::mapAtom

char Residue::name[5]

char Residue::name_1[2]

char Residue::name_all[15]

char Residue::No[6]

float Residue::phi

float Residue::psi

int Residue::seqlNo

char Residue::SS[2]

int Residue::startAtomSeqlNo

int Residue::totalAtomNo

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The documentation for this class was generated from the following file:

• lib/PRO.h

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